improved robustness of miseq samplesheet parsing
Merge branch 'develop' of github.com:SciLifeLab/scilifelab into develop
corrected samplesheet entry for missing index sequence
Merge branch 'develop' of github.com:SciLifeLab/scilifelab into develop
Merge branch 'master' of github.com:SciLifeLab/scilifelab into develop
refactored illumina modules, fixed fastq_screen method
Fix wildcard expansion issue. Add output file naming in run_halo
Enclose wildcard in quotes
Make move statements move on file names since wildcard expansion is shaky
Merge branch 'develop' of github.com:SciLifeLab/scilifelab into develop
added lost run_bcbb_pipeline.py scipt
Merge pull request #208 from b97pla/develop

Develop
added missing template path
Merge pull request #211 from b97pla/develop

added missing template path
Merge remote-tracking branch 'scilifelab/develop' into develop
Add function for getting barcode lane statistics from Demultiplex_stats.htm. Add that output to sample report.
Merge pull request #215 from percyfal/develop

Develop - add function for getting barcode lane stats from Demultiplex_stats. Random halo stuff.
Add fold enrichment to application qc output
Merge pull request #216 from percyfal/develop

Add fold enrichment to application qc output
corrected arguments in call to get_barcode_lane_statistics