Travis Integration.
Add all three supported JDKs to .travis.yml

http://about.travis-ci.org/docs/user/languages/java/
Update in the hope that travis will start.
Stop quiet build.
Fixes issue 4 Missing method in OWLIndividual
Update all JavaCharStream versions to fix the UTF BOM issue
added Turtle tests
Removed deprecations
update documentation for java 6 and maven
removed unused exceptions
Added parameter to OWLOntologyFormat for temp files, default disabled.