Refactored a little
Mainly tidying
Fix
Typo
notes
appendicies, formatting
reorganization
checkpoint bibliography
Add mhchem
Add Materials and Methods

-metabolic models
-optimization libraries
import e coli
Inserted explanation of knitr stuff
Small updates
Refactoring, beginning of E.Coli
Many changes
Compiles correctly

  text+headers+captions (#headers/#floats/#inlines/#displayed)
  1102+17+0 (7/0/7/0) File(s) total: background.tex
  3+4+0 (1/0/0/0) File(s) total: conclusion.tex
  15+3+0 (3/0/0/0) File(s) total: dissertation.tex
  112+3+0 (2/0/0/0) File(s) total: introduction.tex
  1880+46+7 (19/2/5/0) File(s) total: methods.tex
  1199+28+26 (17/2/0/0) File(s) total: results.tex