Initializing .gitignore
Initializing README.md
Removing convert_sample_id_map_to_otu_table.py and use Emperor instead of KiNG
Removing convert_sample_id_map_to_otu_table.py
Restoring convert_category_map_to_id_map.py
Remove usage of convert_category_map_to_id_map.py and modifiy_qiime_parameters.py
Remove usage of convert_sample_id_map_to_otu_table.py in cluster_samples.xml
Remove usage of convert_sample_id_map_to_otu_table.py and modify_qiime_parameters.py in jackknife_cluster_samples.xml
Remove usage of convert_sample_id_map_to_otu_table.py and modify_qiime_parameters.py
Fix script/lib/test information
Fixing test_make_pcoa_html.py to reflect the usage of Emperor
Adding add_counts_to_mapping.py and fixing xml files