added ability to enable/disable individual sections of the Profiler
added docs for Output class  property
added Security class docs, cleaned up Input class for changes to both
added changelog note for CSRF - still needs documenting in Security class docs
changelog note for index.php based routing overrides
changelog note for assign_to_config index.php values
changelog note for directory_trigger
added swap_pre, autoinit, and stricton database configuration explanations
added docs for convert_accented_characters() in the Text Helper
added docs for * filter for allowed_types of Upload class
updated Upload class docs to be accurate with the * filter for allowed_types
added changelog item for XML-RPC server 'object' config item
changelog note for subclass prefix automatically being applied by the loader.
changelog note for bugfix to log entries
changelog note for bugfix in Profiler dealing with failed queries
added docs for application Packages, added third_party folder to the application folder
full on scaffolding removal
got rid of some redundancy in the preliminary jQuery lib docs
added @php4 tag to compat helper (thanks Phil)
grammer fixup - we're all about grammer (yes, if you're reading this thinking "grammar" I'm trolling you).