Creating a branch for changes required for VXQuery. This commit includes the patch for issue 99.
Add support for stopping the ResultStateSweeper thread in to the classes that create it.
Merge branch 'master' into ecarm002/vxquery_compatibility
Merged hyracks master back into VXQuery branch.
Merged hyracks master back into VXQuery branch.
Instead of adding stop commands to the running thread, this patch changes the thread to be a daemon thread.
Instead of adding stop commands to the running thread, this commit changes the thread to be a daemon thread.
Commented out a few lines in the MemoryManager based on feedback form the Hyracks group.
Merged hyracks master back into VXQuery branch.
complete the GetFastaStata Parallel, wait for test
refactor gage to map reduce job
remove un-nessacery files
add some comments
use counter to get fast stats
Merge commit '41238e19b16a842aac4519aca40ffb01a977d49f' into nanzhang/genomix_gage_feature

# By Anbang Xu
# Via Anbang Xu
* commit '41238e19b16a842aac4519aca40ffb01a977d49f':
  If using Enum, change byte/boolean to it. Temporarily P2 code for clean code
  Refactor the SimpleBubbleMerge
add gageStats with map reduce counters
modify statsCode
remove unrelated file
add MUMMer
fix in-place update