Added local db options and dbSNP version to slurm template.
Simplistic family analysis.
slurm template now uses a BASE directory.
secondary analysis now now includes LeftAlign of final VCF output using GATK.
Tertiary analysis is now compatible with ANNOVAR 2013Mar release. Full sifting excluding pp2 filter produced automagically. Now uses leftAligned VCF files from secondary analysis.