NCBC-299: Fix project references.

The last commit for NCBC-299 has a couple of errors.  One is that some
subprojects reference NewtonsoftJSON and shouldn't.  Second is that one
of the projects references the wrong thing between 3.5/4.0.

Change-Id: Ie116feb16a3c112658693bb108174856fe652ca9
Reviewed-on: http://review.couchbase.org/30035
Tested-by: Jeffry Morris <jeffrymorris@gmail.com>
Reviewed-by: Matt Ingenthron <matt@couchbase.com>