Merge pull request #135 from jauhien/master

sci-physics/herwig++: fix dependency on sci-physics/thepeg
WIP: PySurfer ebuild
sci-chemistry/freeon-1.0.8-r1: Added python support.

The package provides some python scripts. This revision inherits python-r1.

Package-Manager: portage-2.2.7
FIX: don't import surfer in septup.py
ENH: nibabel stable ebuild
nibabel Manifest
fix keywords messup
Merge pull request #137 from mluessi/nibabel_1.3.0

ENH: nibabel stable ebuild
use src_prepare, add deps
sci-physics/lammps-20131111: Version bump.

Package-Manager: portage-2.2.7
sci-libs/trilinos: Fix project config directory; version bump

This commit fixes the installation path for the Trilinos project
configuration so that it now resides under $(get_libdir)/cmake instead of
$(get_libdir)/trilinos/cmake.

Furthermore, a version bump to 11.4.2
Merge pull request #138 from tamiko/bump_trilinos

sci-libs/trilinos: Fix project config directory; version bump
sci-libs/trilinos: Bugfixes:

Add forgotten manifest statement for trilinos-11.4.2

Also provide a env.d/99trilinos file that registers $(get_libdir)/trilinos
into LDPATH so that the library locations are actually known by the dynamic
linker.
use PYTHON_USEDEP
Merge pull request #139 from tamiko/fix_trilinos_ldpath

sci-libs/trilinos: Bugfixes:
sci-chemistry/freeon-9999: Cleanup of ebuild.

Package-Manager: portage-2.2.7
sci-chemistry/freeon-9999: Cleanup of ebuild.

Package-Manager: portage-2.2.7
Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci
sci-biology/mira-4.0_rc4: Added 4.0_rc4 release candidate. Removing the sed hack redirecting autoconf to config/m4/ instead of m4/ because upstream accepted that source tree layout change in _rc3 already.

Package-Manager: portage-2.2.7
Drop broken old crap

Signed-off-by: Justin Lecher <jlec@gentoo.org>