updated sciclone to use github
Merge branch 'master' of ssh://git/srv/git/genome
moved Sciclone to the top level of gmt
moved CopyCat to a top-level namespace
Updated class browser cache.
Updated `genome` tab completion.
Updated `gmt` tab completion.
GM: update output for import metadata
GM: import/export metadata uses utility test compare_ok
PerLaneTophat will now use 12 threads
Merge branch 'master' of ssh://git/srv/git/genome
skip ./. as .
Merge remote-tracking branch upstream/$:{upbranch}