Moved the autoloader out of the main class.
Also started using a coding standard that PHPStorm will help.
Cleaning up the configuration classes a little bit.
Fixed the autoloader, moved it a level deeper which broke the file searching.
Commiting some changes before I move most of the Rei files for the restructure.
Moved all the files around a little, once again the application is broken.
Attempting to fix the unit tests for the classes I am keeping but renamed.
Completed the accept header utility.