[FORMAT] MzTab format update to 1.0RC3

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10956 6adb6e08-d915-0410-941f-83917bcadc18
[FORMAT] initial mzTab reading methods

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10961 6adb6e08-d915-0410-941f-83917bcadc18
[FORMAT,TEST] added mzTab tests and fixed some bugs

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10964 6adb6e08-d915-0410-941f-83917bcadc18
[FIX, FORMAT] some minor bug fixes to mzTab

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10965 6adb6e08-d915-0410-941f-83917bcadc18
[FORMAT] more mzTab sepcific fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10966 6adb6e08-d915-0410-941f-83917bcadc18
[FIX] fixed segfault in MSSim-Raw introduced with debugging code in [10566]

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10967 6adb6e08-d915-0410-941f-83917bcadc18
[FORMAT] yet another round of mzTab changes integrated into the parser and writer

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10969 6adb6e08-d915-0410-941f-83917bcadc18
[DOCU] fixed spelling and formatting for ProteinResolver

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10970 6adb6e08-d915-0410-941f-83917bcadc18
[DOC] better predecessor/successor tools for ProteinResolver

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10972 6adb6e08-d915-0410-941f-83917bcadc18
[DOC,FIX] fixed parameter unique description in ID filter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10974 6adb6e08-d915-0410-941f-83917bcadc18
[FORMAT,TEST] added optional column support in mzTab

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10976 6adb6e08-d915-0410-941f-83917bcadc18
[NOP] removed quotes for consistency reasons

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10977 6adb6e08-d915-0410-941f-83917bcadc18
[FORMAT] full support for localization scores in MzTab modifications

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10978 6adb6e08-d915-0410-941f-83917bcadc18
[FEATURE] Added optional m/z scoring function to FeatureFindingMetabo class.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10979 6adb6e08-d915-0410-941f-83917bcadc18
[FIX] removed duplicated code and cleaned input/output parameters for ProteinResolver

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10981 6adb6e08-d915-0410-941f-83917bcadc18
[NOP] minor optimization (if at all)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10982 6adb6e08-d915-0410-941f-83917bcadc18
[FIX] EICExtractor now sorts MSExperiment before quant, since AreaIterator depends on sorted spectra

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10983 6adb6e08-d915-0410-941f-83917bcadc18
[FEATURE,FIX] allow disconnected input nodes which contain non-existing files (e.g. only valid on other systems with different mount points); this allows easy switching between two sets of input nodes - one set for each system. Once connected, the files need to be present obviously

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10984 6adb6e08-d915-0410-941f-83917bcadc18
[FIX] * avoid TOPPView crash when jumping to area without any data (using Ctrl-g)
 * fix warning in TOPPBase

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10987 6adb6e08-d915-0410-941f-83917bcadc18
[FIX/FEATURE] * make MSExperiment a little more fail-safe/verbose in debug mode

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10989 6adb6e08-d915-0410-941f-83917bcadc18