[New] UtilsPathogens.py: utilities for the pathogen groups data.
[New] get_proteins_from_pfam.py: retrieve proteins containing any of the listed Pfam domains. The list of Pfam domains can be passed in a file or by stdin.
[Modified] Updated to the latest and stable database schema
[Modified] Counting exclusive architectures at species and strain levels. Collapsed pathogen groups integration (it changes the counts..)
[Modified] Counting exclusive domains at species and strain levels. Collapsed pathogen groups integration (it changes the counts..)
[Modified] Exclusive and core information now also at domain level.
[Modified] argparse module used to enhance the UX. Documentation improved.
[New] Methods getDomainsIterator, getNumSpeciesPathogen and getProteins ;[Modified] Documentation improved.
Merge remote-tracking branch 'origin/master'