Commit befor moving 3.1 and 3.5 to the subfolder bror
.--This line, and those below, will be ignored--

M    3.1/maine/runtraj
A    3.1/FVCOM_read
AM   3.1/FVCOM_read/sectinf.F
AM   3.1/FVCOM_read/data_run.F
AM   3.1/FVCOM_read/hot_start_data.F
AM   3.1/FVCOM_read/depth_grad.F
AM   3.1/FVCOM_read/vdif_uv.F
AM   3.1/FVCOM_read/mod_types.F
AM   3.1/FVCOM_read/theta.F
AM   3.1/FVCOM_read/mod_atmotide.F
AM   3.1/FVCOM_read/mod_gotm.F
AM   3.1/FVCOM_read/water_depth.F
AM   3.1/FVCOM_read/adjust2d3d.F
AM   3.1/FVCOM_read/mod_equitide.F
AM   3.1/FVCOM_read/mod_northpole.F
AM   3.1/FVCOM_read/mod_balance_2d.F
AM   3.1/FVCOM_read/out_binary.F
AM   3.1/FVCOM_read/pdomdec.F
AM   3.1/FVCOM_read/report.F
AM   3.1/FVCOM_read/dens3.F
AM   3.1/FVCOM_read/adjust_temp.F
AM   3.1/FVCOM_read/aver_s.F
AM   3.1/FVCOM_read/archive.F
AM   3.1/FVCOM_read/initial_uvel.F
AM   3.1/FVCOM_read/bcs_force.F
AM   3.1/FVCOM_read/mod_obcs.F
AM   3.1/FVCOM_read/out_sms_one.F
AM   3.1/FVCOM_read/domdec.F
AM   3.1/FVCOM_read/bcond_ts.F
AM   3.1/FVCOM_read/mod_ncdio.F
AM   3.1/FVCOM_read/adv_t.F
AM   3.1/FVCOM_read/arcrst.F
AM   3.1/FVCOM_read/adv_uv_edge_gcn.F
AM   3.1/FVCOM_read/startup.F
AM   3.1/FVCOM_read/advection_edge_gcy.F
AM   3.1/FVCOM_read/mod_lag.F
AM   3.1/FVCOM_read/svan.F
AM   3.1/FVCOM_read/cell_area.F
AM   3.1/FVCOM_read/genmap.F
AM   3.1/FVCOM_read/shutdown_check.F
AM   3.1/FVCOM_read/out_avge.F
AM   3.1/FVCOM_read/getdim.F
AM   3.1/FVCOM_read/wreal.F
AM   3.1/FVCOM_read/baropg.F
AM   3.1/FVCOM_read/utilities.F
AM   3.1/FVCOM_read/atg.F
AM   3.1/FVCOM_read/brough_ud.F
AM   3.1/FVCOM_read/chn_run.dat
AM   3.1/FVCOM_read/exa_run.dat
AM   3.1/FVCOM_read/bcond_gcy.F
AM   3.1/FVCOM_read/set_bndry.F
AM   3.1/FVCOM_read/makefile
AM   3.1/FVCOM_read/mod_clock.F
AM   3.1/FVCOM_read/adv_q_gcy.F
AM   3.1/FVCOM_read/advave_edge_gcy.F
AM   3.1/FVCOM_read/makedepends
AM   3.1/FVCOM_read/shape_coef_gcy.F
AM   3.1/FVCOM_read/mod_utils.F
AM   3.1/FVCOM_read/extuv_edge.F
AM   3.1/FVCOM_read/ghostuv.F
AM   3.1/FVCOM_read/initial_ts.F
AM   3.1/FVCOM_read/vdif_ts_gom.F
AM   3.1/FVCOM_read/depth_check.F
AM   3.1/FVCOM_read/mod_wqm.F
AM   3.1/FVCOM_read/sinter.F
AM   3.1/FVCOM_read/dens2.F
AM   3.1/FVCOM_read/bracket.F
AM   3.1/FVCOM_read/tge.F
AM   3.1/FVCOM_read/aver_t.F
AM   3.1/FVCOM_read/mod_main.F
AM   3.1/FVCOM_read/bcond_bfw.F
AM   3.1/FVCOM_read/mod_inp.F
AM   3.1/FVCOM_read/alloc_vars.F
AM   3.1/FVCOM_read/advection_edge_gcn.F
AM   3.1/FVCOM_read/brough_gom.F
AM   3.1/FVCOM_read/dens.F
AM   3.1/FVCOM_read/adv_q.F
A    3.1/FVCOM_read/test
AM   3.1/FVCOM_read/test/utilities.F
AM   3.1/FVCOM_read/test/mod_inp.f90
AM   3.1/FVCOM_read/test/chn_run.dat
A    3.1/FVCOM_read/test/mod_inp.mod
AM   3.1/FVCOM_read/test/mod_prec.f90
AM   3.1/FVCOM_read/test/a.out
A    3.1/FVCOM_read/test/mod_prec.mod
AM   3.1/FVCOM_read/test/exa_run.dat
A    3.1/FVCOM_read/test/fort.43436
AM   3.1/FVCOM_read/test/mod_utils.f90
A    3.1/FVCOM_read/test/test.f90
A    3.1/FVCOM_read/test/mod_utils.mod
AM   3.1/FVCOM_read/adv_s.F
AM   3.1/FVCOM_read/vdif_ts.F
AM   3.1/FVCOM_read/mod_ncdave.F
AM   3.1/FVCOM_read/conv_over.F
AM   3.1/FVCOM_read/RELEASE_NOTES
AM   3.1/FVCOM_read/extel_edge.F
AM   3.1/FVCOM_read/initial_qql.F
AM   3.1/FVCOM_read/mod_probe.F
AM   3.1/FVCOM_read/vertvl_edge.F
AM   3.1/FVCOM_read/vdif_q.F
AM   3.1/FVCOM_read/viz.F
AM   3.1/FVCOM_read/mod_spherical.F
AM   3.1/FVCOM_read/mod_wd.F
AM   3.1/FVCOM_read/adv_uv_edge_gcy.F
AM   3.1/FVCOM_read/mod_assim.F
AM   3.1/FVCOM_read/set_sigma.F
AM   3.1/FVCOM_read/bcond_gcn.F
AM   3.1/FVCOM_read/advave_edge_gcn.F
AM   3.1/FVCOM_read/adv_q_gcn.F
AM   3.1/FVCOM_read/mod_par.F
AM   3.1/FVCOM_read/us_fvcom.F
AM   3.1/FVCOM_read/bcmap.F
AM   3.1/FVCOM_read/shape_coef_gcn.F
AM   3.1/FVCOM_read/brough.F
AM   3.1/FVCOM_read/closefiles.F
AM   3.1/FVCOM_read/mod_prec.F
AM   3.1/FVCOM_read/iofiles.F
AM   3.1/FVCOM_read/phy_baropg.F
A    3.1/cleanloop.f95
A    trunk
A    bror
A    3.5/FVCOM_read
AM   3.5/FVCOM_read/sectinf.F
AM   3.5/FVCOM_read/data_run.F
AM   3.5/FVCOM_read/hot_start_data.F
AM   3.5/FVCOM_read/depth_grad.F
AM   3.5/FVCOM_read/vdif_uv.F
AM   3.5/FVCOM_read/mod_types.F
AM   3.5/FVCOM_read/theta.F
AM   3.5/FVCOM_read/mod_atmotide.F
AM   3.5/FVCOM_read/mod_gotm.F
AM   3.5/FVCOM_read/water_depth.F
AM   3.5/FVCOM_read/adjust2d3d.F
AM   3.5/FVCOM_read/mod_equitide.F
AM   3.5/FVCOM_read/mod_northpole.F
AM   3.5/FVCOM_read/mod_balance_2d.F
AM   3.5/FVCOM_read/out_binary.F
AM   3.5/FVCOM_read/pdomdec.F
AM   3.5/FVCOM_read/report.F
AM   3.5/FVCOM_read/dens3.F
AM   3.5/FVCOM_read/adjust_temp.F
AM   3.5/FVCOM_read/aver_s.F
AM   3.5/FVCOM_read/archive.F
AM   3.5/FVCOM_read/initial_uvel.F
AM   3.5/FVCOM_read/bcs_force.F
AM   3.5/FVCOM_read/mod_obcs.F
AM   3.5/FVCOM_read/out_sms_one.F
AM   3.5/FVCOM_read/domdec.F
AM   3.5/FVCOM_read/bcond_ts.F
AM   3.5/FVCOM_read/mod_ncdio.F
AM   3.5/FVCOM_read/adv_t.F
AM   3.5/FVCOM_read/arcrst.F
AM   3.5/FVCOM_read/adv_uv_edge_gcn.F
AM   3.5/FVCOM_read/startup.F
AM   3.5/FVCOM_read/advection_edge_gcy.F
AM   3.5/FVCOM_read/mod_lag.F
AM   3.5/FVCOM_read/svan.F
AM   3.5/FVCOM_read/cell_area.F
AM   3.5/FVCOM_read/genmap.F
AM   3.5/FVCOM_read/shutdown_check.F
AM   3.5/FVCOM_read/out_avge.F
AM   3.5/FVCOM_read/getdim.F
AM   3.5/FVCOM_read/wreal.F
AM   3.5/FVCOM_read/baropg.F
AM   3.5/FVCOM_read/utilities.F
AM   3.5/FVCOM_read/atg.F
AM   3.5/FVCOM_read/brough_ud.F
AM   3.5/FVCOM_read/chn_run.dat
AM   3.5/FVCOM_read/exa_run.dat
AM   3.5/FVCOM_read/bcond_gcy.F
AM   3.5/FVCOM_read/set_bndry.F
AM   3.5/FVCOM_read/makefile
AM   3.5/FVCOM_read/mod_clock.F
AM   3.5/FVCOM_read/adv_q_gcy.F
AM   3.5/FVCOM_read/advave_edge_gcy.F
AM   3.5/FVCOM_read/makedepends
AM   3.5/FVCOM_read/shape_coef_gcy.F
AM   3.5/FVCOM_read/mod_utils.F
AM   3.5/FVCOM_read/extuv_edge.F
AM   3.5/FVCOM_read/ghostuv.F
AM   3.5/FVCOM_read/initial_ts.F
AM   3.5/FVCOM_read/vdif_ts_gom.F
AM   3.5/FVCOM_read/depth_check.F
AM   3.5/FVCOM_read/mod_wqm.F
AM   3.5/FVCOM_read/sinter.F
AM   3.5/FVCOM_read/dens2.F
AM   3.5/FVCOM_read/bracket.F
AM   3.5/FVCOM_read/tge.F
AM   3.5/FVCOM_read/aver_t.F
AM   3.5/FVCOM_read/mod_main.F
AM   3.5/FVCOM_read/bcond_bfw.F
AM   3.5/FVCOM_read/mod_inp.F
AM   3.5/FVCOM_read/alloc_vars.F
AM   3.5/FVCOM_read/advection_edge_gcn.F
AM   3.5/FVCOM_read/brough_gom.F
AM   3.5/FVCOM_read/dens.F
AM   3.5/FVCOM_read/adv_q.F
A    3.5/FVCOM_read/test
AM   3.5/FVCOM_read/test/utilities.F
AM   3.5/FVCOM_read/test/mod_inp.f90
AM   3.5/FVCOM_read/test/chn_run.dat
A    3.5/FVCOM_read/test/mod_inp.mod
AM   3.5/FVCOM_read/test/mod_prec.f90
AM   3.5/FVCOM_read/test/a.out
A    3.5/FVCOM_read/test/mod_prec.mod
AM   3.5/FVCOM_read/test/exa_run.dat
A    3.5/FVCOM_read/test/fort.43436
AM   3.5/FVCOM_read/test/mod_utils.f90
A    3.5/FVCOM_read/test/test.f90
A    3.5/FVCOM_read/test/mod_utils.mod
AM   3.5/FVCOM_read/adv_s.F
AM   3.5/FVCOM_read/vdif_ts.F
AM   3.5/FVCOM_read/mod_ncdave.F
AM   3.5/FVCOM_read/conv_over.F
AM   3.5/FVCOM_read/RELEASE_NOTES
AM   3.5/FVCOM_read/extel_edge.F
AM   3.5/FVCOM_read/initial_qql.F
AM   3.5/FVCOM_read/mod_probe.F
AM   3.5/FVCOM_read/vertvl_edge.F
AM   3.5/FVCOM_read/vdif_q.F
AM   3.5/FVCOM_read/viz.F
AM   3.5/FVCOM_read/mod_spherical.F
AM   3.5/FVCOM_read/mod_wd.F
AM   3.5/FVCOM_read/adv_uv_edge_gcy.F
AM   3.5/FVCOM_read/mod_assim.F
AM   3.5/FVCOM_read/set_sigma.F
AM   3.5/FVCOM_read/bcond_gcn.F
AM   3.5/FVCOM_read/advave_edge_gcn.F
AM   3.5/FVCOM_read/adv_q_gcn.F
AM   3.5/FVCOM_read/mod_par.F
AM   3.5/FVCOM_read/us_fvcom.F
AM   3.5/FVCOM_read/bcmap.F
AM   3.5/FVCOM_read/shape_coef_gcn.F
AM   3.5/FVCOM_read/brough.F
AM   3.5/FVCOM_read/closefiles.F
AM   3.5/FVCOM_read/mod_prec.F
AM   3.5/FVCOM_read/iofiles.F
AM   3.5/FVCOM_read/phy_baropg.F


git-svn-id: http://svn.tracmass.org/trunk@16 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@1 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
First commit of version 3.3.4 form doos. This will (hopefully) be  the main trunk for the project. 


git-svn-id: http://svn.tracmass.org/trunk@19 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@2 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
Started to change the code to config files instead. rco and orc done. Use test_init_params.f95 for checking. 


git-svn-id: http://svn.tracmass.org/trunk@21 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@3 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
dded makefile.
Changed the compile procedure to a tre step system- cpp, o-files, linking.
Removed includes of subroutines in main.f95.
Moved main.f95 to top level.
Added init_par as a subroutine to read the namelist files.
Created a system for defining PROJECT_NAME and CASE_NAME at compile time.
Rewrote the density subroutine to a more general mode. used the sw_dens0 matlab routine from WHOI. Lifted stat.f95 to top level.
Rewrote coord.f95 to general form.



git-svn-id: http://svn.tracmass.org/trunk@22 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@4 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
Built method for setting case, name, and two integers via arguments.


git-svn-id: http://svn.tracmass.org/trunk@23 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@5 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
Edited Makefile to work on ocean. Turned off mysql and change netcdf paths.


git-svn-id: http://svn.tracmass.org/trunk@25 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@6 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
Fixed a bunch of bugs and stuff. rco is now running, even if no trajectories are seeded?


git-svn-id: http://svn.tracmass.org/trunk@26 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@7 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
Just checking if doos .csrch file is setup correctly. Looks like it.


git-svn-id: http://svn.tracmass.org/trunk@27 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@8 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
rco version verkat funka i dag !
 
-This line, and those below, will be ignored--

M    main.f95
M    Makefile
M    rco/readfield.f95
M    rco/rco_run.in
M    init_par.f95
M    loop.f95


git-svn-id: http://svn.tracmass.org/trunk@28 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@9 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
Trying to get gfortran working as a commpiler. Still major problems with cpp. This is a non functioning commit done to mode the cahanges from pierik to niak.


git-svn-id: http://svn.tracmass.org/trunk@29 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@10 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
Strange life, now it seems like gfortran works, but no dice with g95...


git-svn-id: http://svn.tracmass.org/trunk@30 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@11 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
Arrgh!!! Make clean did not remove readfield.o. Now, everything seems to work with both g95 and gfortran. netcdf will have to be rewritten for the different compilers when using fink though...


git-svn-id: http://svn.tracmass.org/trunk@31 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@12 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
har fixat så den funkar från lappen nu med diverse ändingar gällande iene



git-svn-id: http://svn.tracmass.org/trunk@32 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@13 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
Fixat ett par saknade grejer i infilerna men turb funkar fortfarande inte



git-svn-id: http://svn.tracmass.org/trunk@33 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@14 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
nu ska rco funka för både med och utan turbulens men måste testas för längre körningar



git-svn-id: http://svn.tracmass.org/trunk@34 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@15 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
testar svn under brors guide



git-svn-id: http://svn.tracmass.org/trunk@35 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@16 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
Klart att jag kan skriva paa engleska utan vaara fina bokstaever.



git-svn-id: http://svn.tracmass.org/trunk@36 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@17 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
testar liten foeraendring



git-svn-id: http://svn.tracmass.org/trunk@37 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@18 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
fixat naagra buggar + faatt sim att funka



git-svn-id: http://svn.tracmass.org/trunk@38 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@19 dd566b57-2d5a-cdae-10d7-ce57b7db7bff
laggt till katalogen sim



git-svn-id: http://svn.tracmass.org/trunk@39 2ee5d717-d111-0410-bb1d-d2df4af4126a

git-svn-id: https://github.com/TRACMASS/tracmass.git@20 dd566b57-2d5a-cdae-10d7-ce57b7db7bff