removed the specious code trying to make RMSD assignment more memory-efficient, but actually doing nothing
Link to the msmbuilder-user list in the README
move the logic into the script
added docstring
fix typo
Merge pull request #162 from rmcgibbo/assign_bug

Move RMSD atom loading hack into the script and out of the library
sidelining #60, removed incorrect help text in ConvertDataToHDF.py
updated BACE documentation a little
more minor updates to BACE docs
minor fix to bug in BACE option parsing
fixed bug in BACE filter function
Reworked lumping code re issue #165
Minor docstring update
Added utils.py to lumping, changed Lumper to EigenvectorLumper
Removed deap as requirement.
fixed minor bug in implied timscales code to prevent parallel processes from opening too many files
Added rebuild project script
Testing idea for fixing travis
Testing second idea for fixing travis re isssue #170
Testing idea 3 for fixing travis re isssue #170