Semi-global aligment computation on CPU fixed.
Version
Removed 32k limit for the number of reference sequences
Bamtools updated to 2.3.0
Paired-end BAM output fixed
Fix for "number of written lines" output
End-free alignment fixed (GPU)
Placement of gaps changed for end-free aligments
OpenCL code cleanup
Add --no-progress parameter
Fixed opencl/lib permissions
Fixed opencl/lib permissions
Fixed opencl/lib permissions
Merge branch 'master' of /software/git/repositories/NextGenMap.git/
Fixed opencl/lib permissions