Added 'extract' to SnpSift phastCons: You can extract sub-intervals having high conservation from a ChIP-seq experiment (then perform Motif analysis).


git-svn-id: https://svn.code.sf.net/p/snpeff/code@827 3341ced4-5d85-40e2-8a85-8d6cb0b68e6b
Bug in VcfEntry constructor fixed by Louis.


git-svn-id: https://svn.code.sf.net/p/snpeff/code@828 3341ced4-5d85-40e2-8a85-8d6cb0b68e6b


git-svn-id: https://svn.code.sf.net/p/snpeff/code@829 3341ced4-5d85-40e2-8a85-8d6cb0b68e6b
Merge remote-tracking branch 'upstream'