the read-search_backup.jsp is no longer used, deleted
SearchSignificantExpressedGenes tool was updated, functionality to normalize by mean/median centering
SearchSignificantExpressedGenes tool was updated, the user has 4 options to select: raw intensity, log2 intensity, raw ratio, log2 ratio
Refactoring & initial development of motif tool, integrated with programs in thor server
Refactoring JSP's
Refactoring JSP & .java files, deleting repeted code and unused files
Refactoring, deleting unused files and older logic
Refactoring JSP filenames for acontrol tool
Refactoring 'message' session variable in all JSP & initial development of register module using captcha and MD5
Refactoring SearchMotifs and SearchContigs tools. Simplify logic for coloring regions
Modifications in Perl script and refactoring of two params in motif tool
index.jsp updated
Refactoring Motif Tool, adding functionality to show the three most frequently positions
Update in Term Enrichment tool & initial development of Physiology tool
Gene Merg Term Enrichment tool updated.
updated README ...