Starting 'cufflinks2' branch
unfinished refactoring
unfinished refactoring
unfinished refactoring
cufflinks2
refactoring gbrowser
refactoring gbrowser
Merge with 7d4808c923b6e18a335327b9d4f4ffbc4174b01a
standalone genome browser
standalone genome browser
Merge with 31f148f50aad684ce4f7da80fab072e883e9fe12
unfinished scroll support
cufflinks2
vcftools option for minimum quality
unfinished scroll support
unfinished scroll support
Merge with d2cf5304d009111321f7beb92b637bddb08573c4
Typo fix in FastX clipper.
Reorganized FastX clipper parameters.
Updated the manual.