BWT filter equal mappings
Merge branch 'next' of https://github.com/opencb-hpg/bioinfo-libs into next
Improve some loops and clean code
Remove report stuff from bwt code
BWT Actualization
Fixed conflicts in jtarraga pull
Fix bug in genome.c (support for genomes with a large number of contigs or chromosomes)
new bWT filter added
Remove two-steps in seeding stage, now only one-step seeding
Merge branch 'next' of ssh://amartin/home/hmartinez/appl/bioinfo-c/hpg-aligner/lib/bioinfo-libs into next
Remove some comments
Update seeding and CAL parameters: num_seeds and min_num_seeds_in_cal, and comment some debug messages
Merge branch 'next' of https://github.com/opencb-hpg/bioinfo-libs into next
Update SConscript for vcf/test