Fixes, cleanup, cookie domains, applet persistence method, Java server support

This is a rollup of all the fixes and changes from my fork. I am a little bit iffy on the cookie domain additions, but everything else seems fairly good. It's been awhile since I last touched this stuff; happy to work on anything that's broken.

* updated README.md (gabrielbauman)
* added .gitignore (gabrielbauman)
* fixed cookie domain on non-standard ports (gabrielbauman)
* removed evercookie.min.js to simplify merges (gabrielbauman)
* added domains to standard http cookies (Justin)
* added Java servlet port of PHP components (gabrielbauman)
* added Java applet persistence method, see http://github.com/gabrielbauman/evercookie-applet (gabrielbauman)
* disabled Silverlight auto-upgrade interruption (gabrielbauman)
* fixed Silverlight object appearing on screen (gabrielbauman)
* disabled Install Silverlight link (gabrielbauman)
* removed duplicate/unused evercookie.php (gabrielbauman)
* removed last remaining dependency on jQuery (gabrielbauman)