Removed unnecessary files
Converted 40% of MODULE_TOPMODEL.f90 to structures
Finished MODULE_TOPMODEL
Merge branch 'Colby'
Removed all unused help files
Removed all help files from MODULE_ATMOS.f90
Removed all help files from MODULE_SHARED
Only two help files remaining
Merge branch 'Colby'
Added the DOXYGEN comments for MODULE_IO and MODULE_REGIONAL
Added report
Gitignore
Merge branch 'master' into Colby