Bump freebayes to latest version. Grab GATK gsalib from standard CRAN package
Support for Ubuntu 13.10: update package list and ensure up to date version of fabric installed via setup.py. Fixes #126. Fixes #127
Add additional R libraries for cn.mops: snow and rtracklayer. Update biobambam to latest version to fix Ubuntu 13.10 compile problems. Fixes #129
Update vcflib to latest git revision to include vcfcreatemulti tool
Merge branch 'master' of https://github.com/chapmanb/cloudbiolinux