changed AssignHierarchical to output the correct assignments file. The script now needs a stride to be input by the user.
changed AssignHierarchical to output the correct assignments file. The script now needs a stride to be input by the user.
Merge branch 'assign_hier' of github.com:schwancr/msmbuilder into assign_hier
updated assign hierarchical test. I changed WardAssignments.h5 reference as well as the test function
changed AssignHierarchical.py to actually do what we want. This requires passing the ProjectInfo.yaml file as well as the stride used in clustering since the shape of the assignments file depends on the trajectory lengths in the project info
Merge pull request #256 from schwancr/assign_hier

AssignHierarchical.py Fix