removed debugging print statements
Merge branch 'master' of ssh://git/srv/git/genome
updated workflow submodule to ea4a2bf
Add documentation for annotate sv
Move references to the cancer gene list to dbpath
fix directories being made without group write due to restricted umask
whitespace
move _ignore_table back to GMSchema
pre-fix for dependency on UR bug

This currently depends on a bug in UR that will soon be fixed and will
then need to fall back onto Workflow::DataSource::InstanceSchema as a
consequence of our Postgres/Oracle syncing.
trying to hide class from UR
ignore two more tables
fix case where no PATHS_TO_REMOVE
add missing my
property without column should be marked transient
sort section in preperation for update classes-from-db
only add wingspan option to command if defined
Merge branch 'update_classes'

This is all prep work for upcoming UR changes and for running `ur update
classes-from-db`.
fix alarm
Fix typo
Remove defaults from annotate sv tools