[PTFM-9404] Clone system requirements from template job in dx run --clone
PTFM-9636: Add tests for dx run --clone with systemRequirements

Also cache and display cloned job's systemRequirements in the new
job's details.
Refine dx run input flag behavior

* Make --input-json/--input-json-file override a cloned job's input
* Document change in dx run --input-help
* Add tests