removed
added owl file processing
Updated ChEMBL parser to release 3
Minor fix to chembl r3
Merge pull request #316 from alisoncallahan/chembl-r3

Chembl r3
fix namespace mismatches
fixed change in remote download location
added .log to list
Merge pull request #317 from micheldumontier/biomodels_hotfix

biomodels: fixed change in remote download location
Merge pull request #318 from micheldumontier/affymetrix_hotfix

affymetrix: fix namespace mismatches
initial refseq r3 import
finished run and constructor
finished r3 refseq parser
added test class
added pdb.php executer
started pdb2rdf runner for runparser.php
fixes: changed to new style class instantiation for quad store
fixed: correct imports php-lib/bio2rdfapi.php for Bio2RDFizer parent class
fixed: now importing the correct php-lib module, bio2rdfapi.php, from the bio2rdfapi branch of php-lib
fixed bug in main class