This is my final version before sending to Mila.

Actually I've been working on this for a while on my computer but was
reluctant to commit. Essentially this contains mayor modifications to
the following sources:
  * 0Abstract.tex
  * 1Intro.tex
  * 2-0Methods.tex
  * 3Results.tex
  * 4Discussion.tex
Most of the matherial is based on my first submitted version, revised
by Israel and then revissed again by myself. This means that this
version is already a compiled version from the texts produced by
Israel and myself. Israels part was in red and my part was in blue
--now as we already agreed in allmost all what should be there, I
decided to switch to a uniform black color for most of the text.

The file head.tex has already some modifications in order to be able
to compile in two different ways: one following Bioinformatics class,
intended for submission and the other one to be send to Mila
et. al. This second option allows to set the text in a single
(pagewide) column, numbers in front of each line, wider line spacing
and normal horizontal figure captions. To activate these changes the
following variable should be set at head.tex:
  * \def\docid{0} -> single column output
  * \def\docid{1} -> two column Bioinformatics output
Also head.tex allows to compile the formulas by using the proprietary
MathTimesPro font package by setting \def\mathpro{1} (computer moder
roman fonts for formulas are set by \def\mathpro{0}).

rr