clinseq - chmod on test file
Merge branch 'master' of ssh://git/srv/git/genome
Merge branch 'master' of ssh://git/srv/git/genome
Merge branch 'master' of ssh://git/srv/git/genome
fixed test after changing allowed tumor common names
Merge branch 'master' of ssh://git/srv/git/genome
added example_values to "gmt htseq count", and "where" filter, currently unused
ClinSeq - fix test plan for some converge tests
Merge branch 'master' of ssh://git/srv/git/genome
Updated Genome::Command::WithSavedResults to break inputs down and run N subordinate commands.  No mereg logic yet, and no workflow around the parts (not parallelized, just divided).