Bugfix; correct handling of excluded samples
Correct exclusion of samples from .json file
Add filter config argument
Initial commit of filter config test file
Removed samples excluded in pipeline DB from QC test data
Add copies of Plink QC test data without sample exclusion
Updated QC test data readme
Merge branch 'wtsi-npg.devel' into devel
Merge pull request #154 from keithj/devel

Bugfixes to tests and to gene expression iRODS loader script
Merge branch 'wtsi-npg.devel' into devel
Generate separate illuminus .sim file to reflect sample exclusions; move prefilter into subroutine
Simplify arguments to prefilter
Merge pull request #155 from iainrb/devel

Fixes to prefiltering on illuminus & zcall
Added support for the withdrawn flag to exclude samples from analysis.
Merge remote branch 'wtsi-npg/devel' into devel