- Another small bugfix in GWASCatalog
Merge branch 'master' of https://github.com/molgenis/systemsgenetics.git
Merge branch 'master' of https://github.com/molgenis/systemsgenetics.git
Merge pull request #31 from PatrickDeelen/master

DoubleMatrixDataset extends DoubleMatrix2D allowing it to be used by lots of COLT functions
Merge pull request #32 from PatrickDeelen/master

Fixed some issues with double matrix
Merge pull request #33 from PatrickDeelen/master

Bug fix transpose smallDoubleMatrix. Copy paste is evil
Updates in DoubleMatrixDatasets
fix
fixes
Merge pull request #34 from Bonder-MJ/master

Fixes in matrix2.DoubleMatrixDataset
Merge branch 'master' of https://github.com/molgenis/systemsgenetics.git
- This fixes dependency issues with the newly introduced colt-1.2.0 library, amongst other small fixes.
- This introduces parallel colt into eQTLMapping pipeline
- This sets the default character encoding to UTF-8 for java sources (see pom.xml)
- This should fix the issues with the iText library (save/restore state issue)
- Fixes a small bug in the ImputeToTriTyperV2 converter where filenames were not correctly detected
Merge pull request #35 from harmjanwestra/master

Update to colt-1.2.0, fixes in GWASCatalog and TriTyperGenotypeData for generic genotype reader
Fixed all trityper issues. Current trityper test are succesfull, altough more tests would be nice. Fixed bug in comparator.