Parallelised version of addd_ccds_xrefs.pl.
check required PATCH seq_region_attribs
case fixes for tr_(pseudo)genes
HGNC URL has changed
HGNC URL has changed
Set xremote-debug in per-zmap config if requested.
remove an 'exit' that shouldn't have been committed
keep description field in case we need to get patch accessions from it
(i) update gene biotype according to ASB (ii) set CV terms from Adam as either
hidden_remark or havana_cv attributes (don't rely on them being remarks since
can be added as hidden_remarks)
New seq region for human.
chmod +x
Lace/DataSet.pm: &zmap_config_global: create by refactoring.
ZMap/Core.pm: add a "program" attribute.
ZMap.pm: &new_view: correct an error message.
enzembl.pl: do not call &new with indirect syntax (quietens "perlcritic --stern").
enzembl.pl: do not use eval() (quietens "perlcritic --harsh").
enzembl.pl: do not use map() in a void context (quietens "perlcritic --harsh").
ZMap/Core.pm: &_make_conf: move &mac_os_x_set_proxy_vars to the callers.
Move Bio::Otter::ZMap::Core to Zircon::ZMap::Core .
SQLite: use BEGIN IMMEDIATE transactions.