Rotate each atom in an array of atoms.
Create a rotation matrix in RotationAxis.
Made REMARK 350 record parsing accept variable spacing between items,
since there are several cases of inconsistency in the PDB files
(examples: 1GR5, 1M4X).
Merge pull request #55 from pwrose/master

Made REMARK 350 record parsing accept variable spacing between items,
Adding projection methods to RotationAxis
Add rotate method to RotationAxis

Also made rotation matrix direction right handed 
(Calc.rotate uses a pre-multiply convention)
Ignore chains that are not part of a biological assembly.
Merge branch 'master' of https://github.com/biojava/biojava
fixing compile error
Add a fairly basic genbank writer (mostly ported from BioPython), expose
strand for SequenceLocations (to handle locations which cross the origin
of a circular sequence), and allow for qualifiers on sequence features,
which are needed to write proper genbank sequence annotation
fixing compile error
Remove external dependancy on commons-lang3
Merge pull request #56 from pwrose/master

Ignore chains that are not part of a biological assembly.
Add a test of the Genbank Functionality
Update test to use proper assert for tests
Merge branch 'master' of https://github.com/emckee2006/biojava into emckee2006-master
fixing a check that seems wrong
biojava3-core/src/test/java/org/biojava3/core/sequence/io/GenbankWriterTest.java
accepting patch for #57 . Merge branch 'emckee2006-master'
moving test to correct location