Lean branch init
SNPFinder now accounts for dashes in Muscle alignment to give correct original sequence bp position
Adding additional log files.
SNP position of 0 now reported for '-' in alignment. Contig names for every snp line now reported.
Added README
Moved README to base directory.
Markdown README
README ro README.md
README.md
styled links
README.md edit
added some class variables
added run
Core initially coded.
added logger
Use regex for counting matches.
Removed logger output
Removed function to determine number of columns with data in favor of a single regex.
TableExtractor.pm good and functional.
New interface start.