Clean up and fix tests broken by 8daa4097.

Parrot still suffers from issue #88.
Fix TR_parrot_search.sh to handle new fixtures.
Adds bitmap generation to wavefront_master.
Update webpage to wavefront_master.
Updated submit scripts to process password option correctly.
Modified update_catalog to check for timeout at the top, instead
of within advertise_master_to_catalog.  Previously, it was emitting
a lot of debug messages that suggested it was advertising to the
catalog when it actually was not.
Emit a notice if a worker presents a password but the master is not using one.
w->hostname is only set after receiving a valid ready message,
so just call it 'worker' in errors that happen before ready.
Print the foreman port to stdout so users know without enabling debug messages.
Deprecated -E option in makeflow. Capacity estimation is on by default now.
Deprecated -c option in work_queue_worker. Capacity estimation is on for the foreman by default now.
Rename variable to clearer "fullpath".
Add missing braces and fix result return.
Clearer formatting.
code movement
Move access call.
Add missing .__acl file.
Put Parrot search in sync with Chirp search.

Need to correct certain optimizations for anchored patterns.
Parrot now properly returns paths for search.

Fixes #88.