Call bundle exec with production environment
Updating all http calls to use HTTP_TIMEOUT constant in BiosqlWeb class
Slicing gi2ncbi_taxid fetches
Mistakingly set SLICE_SIZE to 50 for testing
More logging
Test case for missing Thermotoga NrdDh1 assignment
Test case for missing Thermotoga NrdDh1 assignment
Adding subgroup example to calculate tests. (All still passes.)
More logging from calculate to find the missing protein groups
Found the bug. Deleting unnecessary logging (...)
Merge branch 'master' into hot-fixes
Failing test case for Thermotoga NrdD triple count due to three gb entries in input file.
Added test cases to pfitmap_release spec for selected_accessions and all_accessions
Merge branch 'master' of github.com:erikrikarddaniel/pfitmap
Bundle update, and only annotation difference for protein count (migrated up and down)
Adding a setup.sh script to setup the test environment
Fixing the overcount problem in issue #101
Think I've fixed issue #87, accession numbers
Setting SLICE_SIZE to 50000 to avoid slicing. Seems to cause problems with WGS organisms
Starting to remove no_genomes_with_proteins from tests and other places