refactored SubThing processing to simplify
removed a empty println from the compare
renamed all Test data files: purpose based names

renamed "Valid_"  to "_Test" - removed confusion for Expected Tests
renamed "Expected_*" to "*_Expected.sbol.xml"
renamed "Out_*" to "*_Out.sbol.xml"
renamed all Test data files: purpose based names

renamed "Valid_"  to "_Test" - removed confusion for Expected Tests
renamed "Expected_*" to "*_Expected.sbol.xml"
renamed "Out_*" to "*_Out.sbol.xml"
exluding the nbbuild
Merge remote-tracking branch 'origin/all_aubparts_same_pattern'