Cleans up dependencies and adds log4j.
Removes printing of active compounds without the use of a criterion.
Documents a constructor.
Introduces the Criterion interface, and a sibling BioAssayCriterion to the existing MoleculeInAssayCriterion.
Makes BioAssayBag criterion agnostic.
Integrates new type of criterion interfaces to general workflow.
Adds scorer and SimpleDictionary based assay scorer. Keywords also added.
Adapts BioAssayBag and other classes to the new scorer.
Merge branch 'feature/addsKeywordFiltering' into develop