updates to correct warnings with Makefile.am
Updated md file to only include src building instructions as there are no deps. Updated the version number in the md file to reflect the actual software build. Corrected the configure command referenced to install the profile.d and ld.so paths to /etc/ instead of  path.
More updates to the UBUNTU.md
Updated the files for the boost v3 filesystem
updated the UBUNTU.md
Added a comment to the configure.ac file