Made some changes to customize the way that qmake runs.
fixed merge conflict.  master files may cause issue. Should remove from git.
Updated qmake process to skip generation when run through makefile.  Made common parts of fileLoaderPlugins common.
Updated qmake process to skip generation when run through makefile.  Made common parts of fileLoaderPlugins common.
Changed some project files to .prf files.  Moved sgmCommon and acquamanCommon, as the startpoint is now AMFastBuild. Updated readme.