sci-chemistry/concoord: Version Bump; switch license to all-rights-reserved

Package-Manager: portage-2.2.0_alpha166
sci-chemistry/phenix-bin: Version BUmp

Package-Manager: portage-2.2.0_alpha166
sci-chemistry/usf-tools: Drop myself as maintainer

Package-Manager: portage-2.2.0_alpha166
sci-chemistry/usf-tools: Update license

Package-Manager: portage-2.2.0_alpha166
Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci

* 'master' of git+ssh://git.overlays.gentoo.org/proj/sci:
  fix build without emacs
  sci-physics/herwig++: version bump
  sci-physics/thepeg: version bump
  sci-mathematics/cdfplayer: version bump
Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci

* 'master' of git+ssh://git.overlays.gentoo.org/proj/sci:
  Improving mpi linking. It will now work with openmpi as well.
Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci

* 'master' of git+ssh://git.overlays.gentoo.org/proj/sci:
  Drop Werror hack
  Now it builds and loads with 3.8
  More updates to lustre patches
  Update lustre patches. Now it builds against linux 3.8
Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci

* 'master' of git+ssh://git.overlays.gentoo.org/proj/sci:
  Update lustre patches
  initial commit
  Update deps. thanks to Richard Yao
  Update media-gfx/librecad ebuilds.
  Make client and utils as default flags
  Update to reflect latest zfs changes
  nvcc flags dont needed anymore here
  Fix build with cuda enabled
dev-db/cppdb: Import from sunrise

Package-Manager: portage-2.2.0_alpha166
sci-biology/amos: Bump to latest git HEAD, fixes qt problems, #348031

Package-Manager: portage-2.2.0_alpha166
aggregated into sci-chemistry/cs-rosetta

Signed-off-by: Justin Lecher <jlec@gentoo.org>
sci-chemistry/rosetta: Version Bump

Package-Manager: portage-2.2.0_alpha166
Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci

* 'master' of git+ssh://git.overlays.gentoo.org/proj/sci:
  Update patches
  Fix some install path
  Add gentoo style configure
  Fix error in mdt_handler.c
  Update metadata.xml
  Update berkeley_upc-2.16.0.ebuild
  Update patch
  Update patch
  Add patch sended upstream
  Update patch
  Fix sandbox violation during configure
  dev-lang/berkeley_upc: install into libexec
  dev-lang/berkeley_upc: New ebuild for bug#462026
Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci

* 'master' of git+ssh://git.overlays.gentoo.org/proj/sci:
  $PWD dont needed in automake invocation
  Fix escape sequence
  dev-lang/berkeley_upc_translator: new ebuild for bug#462296, thanks to Paul H. Hargrove
sci-libs/cs-rosetta-db: New addition

Package-Manager: portage-2.2.0_alpha166
sci-chemistry/cs-rosetta: New addition

Package-Manager: portage-2.2.0_alpha166
sci-chemistry/rosetta: Rename USE custom-flags -> custom-cflags

Package-Manager: portage-2.2.0_alpha166