Case-insensitive matching of errors/warnings in admin diagnostics
Force lowercase before matching diagnostics logs

As per review feedback - PR #1117
Update submodules
Merge pull request #1096 from will-moore/thumbnail_figure_develop

Thumbnail figure develop
Merge pull request #1117 from zeb/admin-diagnostics-case-insensitive-develop

Case-insensitive matching of errors/warnings in admin diagnostics
Close service if setId failed
Merge pull request #1164 from rleigh-dundee/cpp-libpath

blitz: Remove hardcoded LIBPATH additions
Merge pull request #1157 from snoopycrimecop/merge/develop/submodules

Update develop submodules
Rolling back Bio-Formats submodule pointer

Upgrading via the job failed the OMERO-trunk build:

```
/home/hudson/.hudson/jobs/OMERO-trunk/workspace/src/components/blitz/src/ome/formats/OMEROMetadataStoreClient.java:225:
ome.formats.OMEROMetadataStoreClient is not abstract and does not
override abstract method setXMLAnnotationAnnotator(java.lang.String,int)
in loci.formats.meta.MetadataStore
public class OMEROMetadataStoreClient
```
Clean /usr/local Git repository before calling brew doctor

When formulas are deleted by the bin/brew update operation, files remain
untracked in the main Git repository causing brew doctor to return a non-zero
error code. This commit fixes this by calling git clean -df post brew update.
Note this will potentially wipe out files not related to Homebrew and should
only be used in a testing environment.
correct spelling of "occurred" in Insight
correct spelling of "occurred" in blitz
Merge pull request #1182 from joshmoore/rollback-bf-submodule

Rolling back Bio-Formats submodule pointer
fix NPE in indexing file annotations
Fix getImages() when retrieving the images contained in all P/Ds
Add support for input objects when loading annotations
Add new signature using loaded objects to function headers
Fix header of getObjectAnnotations to include new signatures
Swapping types of interleaved and significantBits
Prune dead symlinks