Merge branch 'develop' of /software/vertres/git/origin/vr-pipe into develop
Merge branch 'develop' of /software/vertres/git/origin/vr-pipe into develop
adding smallest working genotyping data file :)
Merge branch 'develop' of /software/vertres/git/origin/vr-pipe into develop
database setup for one genotyping sample
modified test files for hipsci genotyping
modified quantisnp pipeline and steps
modified penncnv pipeline and steps
added control attribute to the metadata for hipsci genotyping
removed extraneous tests
Merge branch 'develop' of /software/vertres/git/origin/vr-pipe into develop
updtaed test scripts to run bed reformat step
replaced cnv to bed step
pipeline for removal of control data from stem cell cnv data plus first step to reformat cnv to bed