fix patho app
fix gonl app
Merge pull request #404 from dennishendriksen/testing

Fix patho and gonl apps
Small update on VcfToTable protocol
move VCF reader classes to _deprecated module (based on deprecated CSV readers)
Merge pull request #405 from freerkvandijk/master

Update on VcfToTable.ftl
Merge branch 'testing' of git://github.com/molgenis/molgenis_apps
default db action add --> add_ignore_existing
model change: make isAutosomal nillable
aggregate variant data
Merge pull request #407 from dennishendriksen/testing

VCF to pheno converter (variant_gonl.xml) + variant aggregation
Add import time stamp to imported animals.
Merge branch 'testing' of git://github.com/molgenis/molgenis_apps