Add small readme file to examples directory
Refactoring
Delete skeleton directory (is now in a separate branch)
Add example build files (removed machine depended build files)
Vectorization is off by default
Always add Intel libraries when using Intel compiler
Revert "Add MPI_INCLUDED macro if compiled with MPI and netCDF"

This reverts commit 8090ae66c99cf4b84b6e70368d7bd2e32cad8c0c.

This patch breaks IBM MPI and is not required for newer netCDF versions
Fix SConstruct for new ASAGI version
Removed obsolete functions
Removed obsolete functions
Update documentation
Update README.md
Merge branch 'master' into dynamic_displ

Conflicts:
	SConstruct