Replaced hardcoded "magical" numbers in Evidence.cpp

With the dumbnet struct names for those values.
Revert "Replaced hardcoded "magical" numbers in Evidence.cpp"

This reverts commit a9353712354ddbef2559763aa5daa894338f9c39.
Replaced "magic" numbers with the appropriate structs.


ticket #714
Replaced hardcoded "magic" values with the "dumbnet.h"

struct values for better readability, Also We found a bug
within the FeatureSet.cpp when it was not correctly updating
the UDP and ICMP counters.
Removed Comments from Evidence.cpp
Removed TODO located in NovaLibrary.h line 96
Removed TODO from NovaLibrary.h line 79
Removed TODO located in Profile.cpp

set default uptime to 86400 and default min time 0
Replaced TODO with xxx in HoneydConfiguration.h
Removed TODO located in HoneydConfiguration.h line 134
Fixed uptime for second constructor
Copy port values for Portset as opposed to referencing
Ticket #711
Reverted the m_portSets back to previous copying
methodology
ticket #711
BUILD: Add protocol buffer dependencies to the novaInstallHelper.sh

Ticket #724
MESSAGING: Proper fix for segfault on accessing deleted bufferevent

This fixes the workaround that would cause a small memory leak on
connecting a client to novad. The lifecycle of a bufferevent has been made
more explicit, it belongs to the event dispatcher in MessageManager.
Merge branch 'integration' of ssh://helios/home/git/repositories/Nova into integration
Merge branch 'integration' into pulsar
QUASAR: Delete lassoed elements with contextMenu

A right click on a single element or a right click on an element among the 
currently selected elements will bring up the contextMenu, on which the 
user can choose to delete the selected nodes, merge the selected nodes
(not working) and split the selected nodes (only if right clicking on a node
singly and that has a nodeCount higher than 1).