HOTFIX: fixed dependency on bcbb logger object
Merge pull request #123 from b97pla/master

HOTFIX: removed dependency on bcbb logger object
Merge pull request #125 from SciLifeLab/develop

Develop
Merge branch 'develop', remote branch 'origin/develop' into hotfix/fix_restart
Add functions to verify integrity of sample file passed to pm run
Fix failing tests
Fix parameters in call to set_sample_table_values
Explicitly use sample_name instead of v['sample'
Merge branch 'hotfix/fix_restart'
Use abspath for bcbio config files as they could be links
Merge pull request #127 from SciLifeLab/develop

Develop - merge into master
Merge pull request #128 from percyfal/master

Hotfix - fix restart issue
Use sample, not sample_name
Merge pull request #129 from percyfal/master

Hotfix - fix parameter typo
Merge pull request #130 from mayabrandi/develop

Develop
Add support for updating sample run metrics documents with project alias
Merge branch 'hotfix/update_project_alias'
Merge remote branch 'scilifelab/master'
Move arguments back to Meta class in order to avoid option clashes
Merge pull request #135 from SciLifeLab/develop

Develop - Small fix for Mayas RNA things