Removed the option to generate a SNP table and added a custom Mega writer
This script is being removed because it's functionality is redundant with ParseHost.pl
Changed to location of the python installation to upgrade from 2.6 to 2.7
updated the publication info for sequences published in  Nyati J. Phycology (2013)
Removing because updated versions are here: https://github.com/hobrien/PhotobiontDiversity/tree/master/130723
First commit
removing extraneous files
corrected labels
This script is no longer necessary because I am using uclust to make a file of non-redundant sequences