Get and Set columns and rows
More type interoperation
Add migration warning

Development has moved to code.google.com/p/biogo.matrix so that users do
not need to pull all of biogo when they are only interested in linalg.
Make package deprecation automatic
Revision of bed handler - use new feat types

I'm not completely sure of the formatting approach, but it works and
changes to the implementation should leave the API untouched.

An alternative approach to the structure of the collection of Bed* types
was to use embedding resulting in nesting up to 4 levels deep. I felt
that this would be cumbersome for the user, so we have code duplication
here instead.
Revision of gff handler - use new feat types
Documentation improvements
Use new feat type
Update featio to new feat type

Put interface guarantee declarations in gff and bed.
Documentation improvements
Use new seq type
Only handle panics for our errors

The previous approach was hiding runtime panics.
Documentation typos
Circular Name() method

Name() returned the string conversion of Name()!
Missing tests and bad logic

I did not update the tests for alignio and so missed an inverted
conditional.
Clean up kmerindex package

Don't ignore the alphabet of the linear that is being indexed.
Use seq.Strand type rather than int8
More clean up of kmerindex

Abbreviate var names in client packages and make accessor methods more
idiomatic in naming.
Refactor DP costs into struct

This makes handing around the cost paramters simpler and clarifies where
the parameters are important.
Don't even pretend to allocate for interface check

Use nil assignment instead where possible.