changed back the names of badpixelmap and baddatamap for back compatibility
implemented so that the angular correlations can be saved to powder sum (as data/angularCorrelation) and so that angular correlation stacks can be written to a separate file, also tried to fix the cross-correlation bug by changing the length of the size array, but the bug presists...
reverted flags applybadpixelmap, beamcenterx, and beamcentery for back compatability...
Merge branch 'jonas' into giraffe
commented out bufferAssembledNPeaksMin and bufferAssembledNPeaksMax completely to get rid of warnings when compiling
commented out pthread_mutex_lock and pthred_mutex_unlock in saveRadialAverageStack, this has already been done in addToRadialAverageStack and it seems that multiple locks in the same thread results in threads freezing at the end of run....
changed so that the global counter is used in addToRadialAverageStack instead of local (removes bug where radialStack is saved for the first event in class), reverted output name so several files are saved, updated output for radialAverages and powderSums
Merge branch 'jonas' into giraffe