Several changes to haloplex pipeline. Adapter trimming and BWA mem now supported.
Bugfix in TrimAdapters protocol.
Small bugfixes in haloplex pipeline.
Bugfixes on haloplex pipeline
Implemented targeted PCR metrics + coverage into Haloplex pipeline.
Added PCRtarget metrics to template.
Merge pull request #53 from freerkvandijk/master

Several fixes in HaloPlex pipeline