Merge branch 'augmenting365_paginate_repository_history' into develop

Conflicts:
	app/models/ontology.rb
Merge branch 'augmenting_add_history_link_from_files_and_dirs' into develop
Merge branch 'augmenting_add_history_link_from_files_and_dirs' into develop
Removed dead code
Button for manual reparsing of a specific ontology added.

closes #340
try to fix production mode categories
Merge branch 'develop' of github:ontohub/ontohub into develop
another try to fix the categories in Production mode
another try to fix jstree
treeview for owl ontologies
prepairing view for switching between display modes for owl
add git lib test for erroneous path
add implementation of erroneous path check
finish upload, should fix #458
make controller tests pass
add tests for path below file detection
move dirpath to helper
remove debug exception raising
finish #458
configure view for javascript