Updated POD for NonRef.pl to mention that short sequences are excluded
Add CombineCounts.pl, which combine the output from DESeq for each species.
Add ConvertSeq.pl which allows a variety of sequence and alignment file format conversions
Add trunc.pl, which truncates sequences from STDIN
Added FilterSeq.pl ofr filtering sequences on length
Added WriteFasta method that adds a newline after every 60 characters in a string.

This makes it easy to write sequences that conform to the fasta standard (hard wraps
every 60 characters) as follows

use FileParser qw(WriteFasta);
print ">$name\n", WriteFasta($seq), "\n";
Added ExtractEntrez.pl to search for genbank accession numbers and generat a entrez query to limit blast results
Added test files to test scripts:

t/test.fa - one sequence (1225bp plus 220 -'s, 26 n's)
t/raw_seq.txt - one sequence (1225bp plus 220 -'s, 26 n's) with no fasta header
Modified README to include recently added scripts and test files