effect tests revisited
Checking existence of VCF before launching hpg-variant/effect
Code cleanup
TDT test files renamed to a more specific one
First version of result.xml writer
TDT bioformats dependency up-to-date: VCF & GFF parsers remove 'chr'/'chrom', get_alleles gets the position of the GT field
Merge with 'next' branch, conflicts solved
Output file genes_with_variants.txt generation
Output file genes_with_variants.txt generation
Usage of strdup instead of calloc+strcat
Warning shown instead of fatal error when argument not found in configuration file
Build process fixed
Warning shown instead of fatal error when argument not found in configuration file (global options)
Region filter: Consider the matching between chromosomes of the species to analyze with regions to insert
Memory leaks supressed
Solved bug when processing CHB.exon file from the Variant website
--config argument for getting the path of the configuration file
Trailing slash added to output files' path
Writing of output auxiliary files moved from effect_runner. c to auxiliary_files_writer.c
Writing job.status